https://docs.pathomation.com/my/ 2026-05-11T18:42:17+0300 https://docs.pathomation.com/my/ https://docs.pathomation.com/my/lib/tpl/dokuwiki/images/favicon.ico text/html 2026-05-04T14:41:07+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=custom_and_fixed-size_annotations&rev=1777894867&do=diff Custom and Fixed-Size Annotations Do you want to make standard annotations for your project(s)? Do you not like the default annotation colours MyPathomation has available? Or do you need to make annotations that are the same size every time? We've got you covered with Custom Annotations. text/html 2026-05-04T13:47:55+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?image=transparancy_fill_setting.png&ns=&rev=1777891675&tab_details=history&mediado=diff&do=media <img src="https://docs.pathomation.com/my/lib/exe/fetch.php?w=500&h=219&t=1777891675&amp;tok=06ec2c&amp;media=transparancy_fill_setting.png" alt="transparancy_fill_setting.png" /> text/html 2026-05-04T13:08:30+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=how_to_use_annotations&rev=1777889310&do=diff How to Use Slide Annotations My Pathomation comes with a set of tools to annotate and draw on your slides. Besides the annotations you make yourself annotations can also be generated by AI image analysis algorithms, for more details on this function look at section text/html 2026-05-04T09:30:46+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=release_notes&rev=1777876246&do=diff Release Notes Current release Build #3.1.0 (as of Monday March 23th, 2026) = My Pathomation 3.1.0 – Release Notes = 'Release Date:' 23 March 2026 'Release Type:' Minor Release Release note addendum AI annotation behaviour changes clarification April 30th, 2026 text/html 2026-04-30T18:34:44+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?image=annotation_saturation_behaviour_1.png&ns=&rev=1777563284&tab_details=history&mediado=diff&do=media <img src="https://docs.pathomation.com/my/lib/exe/fetch.php?w=499&h=382&t=1777563284&amp;tok=dd965d&amp;media=annotation_saturation_behaviour_1.png" alt="annotation_saturation_behaviour_1.png" /> text/html 2026-04-30T18:34:44+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?image=annotation_saturation_behaviour.png&ns=&rev=1777563284&tab_details=history&mediado=diff&do=media <img src="https://docs.pathomation.com/my/lib/exe/fetch.php?w=499&h=382&t=1777563284&amp;tok=75559b&amp;media=annotation_saturation_behaviour.png" alt="annotation_saturation_behaviour.png" /> text/html 2026-04-30T13:41:55+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=how_to_create_and_manage_a_group_of_users&rev=1777545715&do=diff How to Create and Manage a Group of Users Within your organization it can be helpful to create subdivisions of users in groups, for example to give them access only to specific content such as in these examples: * Year 1 general biology class vs Year 2 human histology class text/html 2026-04-29T14:51:18+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=how_to_make_a_course&rev=1777463478&do=diff How to Make a Course The Courses option allows you to build content consisting of interactive images and text that can be shared with students or collaborators. You will need to be in an organisation to create a course, but you can access any courses that are shared with you. text/html 2026-04-29T14:46:49+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?image=course_editor_screen.png&ns=&rev=1777463209&tab_details=history&mediado=diff&do=media <img src="https://docs.pathomation.com/my/lib/exe/fetch.php?w=500&h=265&t=1777463209&amp;tok=6b1c9d&amp;media=course_editor_screen.png" alt="course_editor_screen.png" /> text/html 2026-04-27T12:24:21+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=inviting_users_to_the_organization&rev=1777281861&do=diff Inviting Users to an Organization Having an Organization in My Pathomation allows you to collaborate with other pathologists, create and assign exams to users, and much more. Of course, to collaborate you need some people to collaborate with. This page will take you through how to invite users into the Organization via the management tab. text/html 2026-03-23T14:00:30+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=glossary&rev=1774263630&do=diff Glossary * WSI - Whole Slide Image * Annotation - a graphical object or layer of object added to a WSI * Collection - a grouping of WSI that share a common context or purpose * Slidebox - a grouping of multiple Collections and/or slides with added metadata for complex projects text/html 2026-03-23T13:55:53+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=enabling_multi_factor_authentication_mfa&rev=1774263353&do=diff Enabling Multi Factor Identification (MFA) Organizations that want to add extra security for their members can activate the requirement to use MFA. From the main menu click on the organization initials icon in the top right hand corner and select 'manage my organization' You can enable MFA here: text/html 2026-03-23T13:55:21+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?image=v3.1.0_user_accept_mfa.png&ns=&rev=1774263321&tab_details=history&mediado=diff&do=media <img src="https://docs.pathomation.com/my/lib/exe/fetch.php?w=500&h=254&t=1774263321&amp;tok=abc90b&amp;media=v3.1.0_user_accept_mfa.png" alt="v3.1.0_user_accept_mfa.png" /> text/html 2026-03-23T13:49:53+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=fast_anonymization_with_pma.start&rev=1774262993&do=diff Fast anonymization with PMA.start How to Use the Anonymize Function Protecting sensitive medical data and the identity of a biopsy's owner is not only ethical/polite, it is a legal responsibility. Many of our software have features to hide potentially identifying information a slide may contain, such as by text/html 2026-03-23T13:47:04+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=sidebar&rev=1774262824&do=diff Getting started * How to make an account in My Pathomation * Your dashboard landing page in My Pathomation * Upgrading your account * Youtube walkthroughs * Release notes Slides * How to upload slides * Viewing slides * Snapshots * Advanced viewing and colour adjustments * How to use annotations * Custom and fixed-size annotations * How to use tags and bookmarks Collections * What is a collection and what can I use this for * How to create a collection * Maki… text/html 2026-03-23T13:41:52+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=heath_data_as_a_part_of_interactions_between_health_care_professionals&rev=1774262512&do=diff Health Data as a part of interactions between Health Care Professionals Many misunderstandings exist about sharing patient information between Health Care Professionals. Most important there is no need to remove healthcare data because of privacy or consent if the sharing of information happens in a diagnostic or curative context. Removing background data like gender, age, antecendents actually induces a risk for error since these are all potentially relevant for making a diagnosis. In other w… text/html 2026-03-23T13:34:08+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=data_compliance_and_wsi&rev=1774262048&do=diff Data compliance and WSI Privacy Regulations and WSI Whole Slide Imaging (WSI) is a relatively new category of patient health data. As such, recently, some efforts have been made to better understand how WSIs (whole slide images) can be utilized in a balancing act: maximizing individual and public benefit, while at the same time, restricting and protecting its access, whenever such access would pose a potential privacy risk and non-compliance with data privacy laws (e.g. GDPR). Although by itse… text/html 2026-03-23T13:29:26+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=interpreting_ai_results&rev=1774261766&do=diff Interpreting AI results After completion of an image analysis AI request the results will be available in the form of annotations in the viewer and as a set of results. If annotations are text labelled by the algorithm the text will appear in the viewer and scale with the zoom level. You can hide the text with the label button for better visibility of the image. text/html 2026-03-23T13:28:19+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?id=running_an_ai_algorithm_on_a_set_of_slides&rev=1774261699&do=diff Running an AI algorithm on a set of slides Selecting the slides and AI algorithms From the Slides sidebar menu you can see all folders and slides available to you. The AI icon is shown next to each slide, you can open the menu to start an AI algorithm for an individual slide by clicking the icon, the same icon is visible after opening an image in the top bar and will also open the menu to select an algorithm for that individual slide. text/html 2026-03-23T13:16:15+0300 rudy (rudy@undisclosed.example.com) https://docs.pathomation.com/my/doku.php?image=v3.1.0_missing_upload_file_warning.png&ns=&rev=1774260975&tab_details=history&mediado=diff&do=media <img src="https://docs.pathomation.com/my/lib/exe/fetch.php?w=500&h=498&t=1774260975&amp;tok=7c1f23&amp;media=v3.1.0_missing_upload_file_warning.png" alt="v3.1.0_missing_upload_file_warning.png" />