User Tools

Site Tools


viewport

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
viewport [2022/02/07 19:42]
yves [Fluorescent content]
viewport [2022/02/07 20:00] (current)
yves
Line 48: Line 48:
 On mobile devices, //​pinching//​ also works (use the pinch manoever to rotate your content, too!). On mobile devices, //​pinching//​ also works (use the pinch manoever to rotate your content, too!).
  
 +==== Thumbnails and labels ====
 +
 +Associated images are images that are part of the whole slide image data package, and provide additinal information about the slide. Examples include a thumbnail image, a scan map, or a label image. The first and the latter of this list are automatically added to the right of the viewport, if they are available.
 +
 +{{ ::​viewport_associates.png?​direct&​400 |}}
 +
 +The label image can be rotated as needed. Clicking on it brings up the image in a separate viewing window.
 +
 +The thumbnail has a blue rectangle drawn on it to indicate the currently viewed region of interest. This widget is a mini-browser in its own right: clicking anywhere on the thumbnail moves the current viewport to that particular area on the slide. The blue rectangle itself can be dragged around to a new location, too.
 +
 +For smaller specimens like (needle) biopsies, the thumbnail can be enlarged so to easier identify individual objects on the slide.
 +
 +[[https://​realdata.pathomation.com/​custom-panels-and-functionality-in-pma-studio/​|Thumbnails,​ label images, and associated images in general can also be requested and presented individually]].
 ==== Keeping track ==== ==== Keeping track ====
  
Line 83: Line 96:
 ==== Z-stacked content ==== ==== Z-stacked content ====
  
 +Similar to fluorescent slides; when a slide turns out to contain mutliple planes / stacks, a new widget appears automatically in the left-hand side of the viewport, allowing the end-user to navigate through the various layers.
 +
 +{{ ::​viewport_zstack.png?​direct&​200 |}}
  
 +We have a [[https://​realdata.pathomation.com/​blur-detection-in-z-stacks/​|blog article on how you can analyze a z-stack]] to artifically compose a new slide that contains the sharpest tile at each position from the slide.
viewport.1644252179.txt.gz ยท Last modified: 2022/02/07 19:42 by yves