advanced
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advanced [2021/05/25 13:25] yves created |
advanced [2021/06/01 16:25] (current) yves |
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| - | ====== Collections and cases ====== | + | ====== Fluorescence and z-stacking ====== |
| When you display slides that contain fluorescent (multi channel) data, or when the slide represents a z-stack, additional selection controls automatically appear in the viewport to allow you to interact with specific file format features as needed. | When you display slides that contain fluorescent (multi channel) data, or when the slide represents a z-stack, additional selection controls automatically appear in the viewport to allow you to interact with specific file format features as needed. | ||
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| === Fluorescent data === | === Fluorescent data === | ||
| + | When fluorescent data is found in a virtual slide, a histogram control panel automatically appears. | ||
| + | |||
| + | {{ :fluo_controls.png?400 |}} | ||
| + | |||
| + | This allows the end-user to mix and match individual channels. Basic histogram clipping features are possible, too. | ||
| === Z-stack data === | === Z-stack data === | ||
| + | When multiple planes (z-stack data) is found in a virtual slide, a slidebar for the various layers automatically appears. | ||
| + | {{ ::z-stacks.png?400 |}} | ||
| - | === Z-stack and fluorescent data combined === | + | This allows the end-user seamlessly navigate through a stack. |
| + | === Combining fluorescence and z-stack data === | ||
| + | When you have slides that contain both multi-channel data and z-stack planes, both controls appear. | ||
| + | |||
| + | {{ ::fluo_and_z-stack_controls_combined.png?400 |}} | ||
| === More options === | === More options === | ||
| - | [[https://www.pathomation.com/pma.studio|PMA.studio]] is Pathomation's flagship viewing environment for all things virtual slide related. When you upgrade from PMA.slidebox to PMA.studio, you gain a range of extra functionality, including histogram clipping and per-channel gamma correction. [[https://www.pathomation.com/pma.studio|Find out more about PMA.studio at our dedicated webpage]]. | + | [[https://www.pathomation.com/pma.studio|PMA.studio]] is Pathomation's flagship viewing environment for all things virtual slide related. |
| + | |||
| + | {{ :fluo_controls_pma_studio.png?400 |}} | ||
| + | |||
| + | When you upgrade from PMA.slidebox to PMA.studio, you gain a range of extra functionality, including histogram clipping and per-channel gamma correction. [[https://www.pathomation.com/pma.studio|Find out more about PMA.studio at our dedicated webpage]]. | ||
advanced.1621938344.txt.gz · Last modified: 2021/05/25 13:25 by yves
